LOC_Os04g38480

Expression Profile

RGAP LOCUS ID LOC_Os04g38480
RAP-DB ID Os04g0457800
Function BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 13

2) CELLO Prediction
localization Cytoplasmic
score 1.474

3) NUCPRED Prediction
localization Non Nuclear
score 0.3

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.57
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSERK2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 3
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.105
NLS score 0.4
Protein Sequence >LOC_Os04g38480.1 protein
MAEARLLRRRRLCLAVPFVWVVAVAVSRVGANTEGDALYSLRQSLKDANNVLQSWDPTLVNPCTWFHVTCNPDNSVIRVDLGNAQLSGALVPQLGQLKNL
QYLELYSNNISGTIPNELGNLTNLVSLDLYLNNFTGFIPETLGQLYKLRFLRLNNNSLSGSIPKSLTNITTLQVLDLSNNNLSGEVPSTGSFSLFTPISF
ANNKDLCGPGTTKPCPGAPPFSPPPPFNPPTPTVSQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRKPEEHFFDVPAEEDPEVHLGQLKRFSLRELQ
VATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRERQPNDP
PLEWQTRTRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLL
ELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKVEMLVDPDLQSGFVEHEVESLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWEEWQKVEVVRQ
EAELAPRHNDWIVDSTYNLRAMELSGPR

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term multicellular organismal development
4
GO Category Biological Process
GO Term abscission
5
GO Category Biological Process
GO Term flower development
6
GO Category Molecular Function
GO Term protein binding
7
GO Category Cellular comBiological Processonent
GO Term plasma membrane
8
GO Category Biological Process
GO Term signal transduction
9
GO Category Molecular Function
GO Term receptor binding
10
GO Category Molecular Function
GO Term kinase activity
11
GO Category Biological Process
GO Term protein modification process
12
GO Category Biological Process
GO Term cellular component organization
13
GO Category Biological Process
GO Term response to endogenous stimulus
14
GO Category Biological Process
GO Term cell cycle
15
GO Category Cellular comBiological Processonent
GO Term cellular_component
16
GO Category Molecular Function
GO Term receptor activity
17
GO Category Molecular Function
GO Term signal transducer activity
18
GO Category Biological Process
GO Term reproduction
19
GO Category Biological Process
GO Term post-embryonic development
20
GO Category Biological Process
GO Term embryo development
Presence of Splice variants YES