LOC_Os04g38410

Expression Profile

RGAP LOCUS ID LOC_Os04g38410
RAP-DB ID Os04g0457000
Function chlorophyll A-B binding protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 11

2) CELLO Prediction
localization Chloroplast
score 3.605

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.92
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) CP24
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.095
NLS score -0.47
Protein Sequence >LOC_Os04g38410.1 protein
MALASTSATASAAVLKTPFLGAKRALANAVGVAGAKPAPRRALVVSAKKSWIPAFKSDAEFINPPWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHG
RWAMAAVLGIFVGQAWSGVPWFEAGAQPEAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQAVEWATPWSRTAENFSNATGEQGYPGGKFFDPLGLG
GETRDGVYIPDTDKLDRLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Cellular comBiological Processonent
GO Term plastid
3
GO Category Biological Process
GO Term response to abiotic stimulus
4
GO Category Cellular comBiological Processonent
GO Term thylakoid
5
GO Category Molecular Function
GO Term binding
6
GO Category Biological Process
GO Term photosynthesis
Presence of Splice variants No