LOC_Os04g37980

Expression Profile

RGAP LOCUS ID LOC_Os04g37980
RAP-DB ID Os04g0452700
Function transporter family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 4.847

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Cytoplasm
score 81
confidence value 0.4
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMST1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.081
NLS score -0.47
Protein Sequence >LOC_Os04g37980.1 protein
MAGGVIVANDGDGSAVDHGGRLTFSVVITCLVAASGGLIFGYDVGISGGVSTMEPFLRRFFPGVVRRMAEARPGNEYCVYDSQALTAFTSSLYVAGLVAS
LVASRVTRAMGRQAVMVMGGALFFAGGAVTGFAVNIAMLIVGRMLLGFGVGFTNQAAPLFLAEMAPTRWRGSLTAGFQFFLAVGVVIATVTNYFASRVPW
GWRLSLGLAGAPAVVIFLGALFLTDTPSSLVMRGDTARARAALLRVRGAGADVEAELKGIVRAVEVARQGEDGAFRRMAARREYRPYLVFAVAMPMFFQL
TGVIVISFFSPLVFRTVGFGSNAALMGNVILGAVNLVCLMLSTLVIDRYGRKVLFMVGGAIMIIAQVGVAWIMGAQVGKNGSEAMARPYAVAVVAFTCLH
TAGFGWSWGPLGWVIPGEIFPVDIRSAGQAMNVSIGLGLTFVQTQSFLAMLCRFRYGTFAYYAAWVAVMTVFIAVFLPETKGVPLESMATVWARHWYWKR
FAREQPKTSADEPTGTY

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants No