LOC_Os04g37619

Expression Profile

RGAP LOCUS ID LOC_Os04g37619
RAP-DB ID Os04g0448900
Function zeaxanthin epoxidase, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 3.5

2) CELLO Prediction
localization Chloroplast
score 2.661

3) NUCPRED Prediction
localization Non Nuclear
score 0.26

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.71
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category FHA

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsABA1|OSZEP1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.118
NLS score -0.22
Protein Sequence >LOC_Os04g37619.1 protein
MALLSATAPAKTRFSLFSHEEAQHPHPHALSACCGGGASGKRQRARARVAAAMRPADAAASVAQAASPGGGGEGTRRPRVLVAGGGIGGLVLALAARRKG
YEVTVFERDMSAVRGEGQYRGPIQIQSNALAALEAIDMSVAEEVMREGCVTGDRINGLVDGISGSWYIKFDTFTPAAERGLPVTRVISRMTLQQILARAV
GDDAILNDSHVVDFIDDGNKVTAILEDGRKFEGDLLVGADGIWSKVRKVLFGQSEATYSEYTCYTGIADFVPPDIDTVGYRVFLGHKQYFVSSDVGAGKM
QWYAFHKEPAGGTDPENGKNKRLLEIFNGWCDNVVDLINATDEEAILRRDIYDRPPTFNWGKGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKS
WQESAKSGTPMDIVSSLRRYEKERILRVSVIHGLARMAAIMATTYRPYLGVGLGPLSFLTKLRIPHPGRVGGRFFIKYGMPLMLSWVLGGNSTKLEGRPL
SCRLSDKANDQLRRWFEDDDALEQAMGGEWYLLPTSSGDSQPIRLIRDEKKSLSIGSRSDPSNSTASLALPLPQISENHATITCKNKAFYVTDNGSEHGT
WITDNEGRRYRVPPNFPVRFHPSDAIEFGSDKKAVFRVKVLSTLPYESARGGPQILQAA

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term lipid metabolic process
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Biological Process
GO Term response to stress
6
GO Category Biological Process
GO Term response to abiotic stimulus
7
GO Category Biological Process
GO Term metabolic process
8
GO Category Biological Process
GO Term signal transduction
9
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES