LOC_Os04g37430

Expression Profile

RGAP LOCUS ID LOC_Os04g37430
RAP-DB ID Os04g0447100
Function lipoxygenase protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Nuclear
score 1.74

3) NUCPRED Prediction
localization Non Nuclear
score 0.68

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.44
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SPH
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.159
NLS score 1.27
Protein Sequence >LOC_Os04g37430.1 protein
MRGGAGMCFASMEAAGSRGMGKGASRRRTARSTAPVGALVERVVVAPAPVEQQRGAGRPEAHPQSVAARAVVTVRRRRKEDAKDRFAEQLDALADRVGRS
VLLELVSTETDPRKGTPKKSKPSALVGWFDKKDVKAERVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRR
VFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERRITDRVYDYDVYNDLGNPDKGVASARPVLGGEQMPYPRRMRTGHASAESRVEYPEPIYVSRDEE
FEEGKNEMLSEGAIKALLHNFMPLLVSSVSPDIRDFAGFHDVDNLFKEGLRLKQALHDQLFQKIPFVRKIQENSEGLLRYDTPDIIKKDKFAWLRDDEFA
RQALAGINPVNIERLQAFPPVSKLDPAVYGPPESAITEEHIIGHLDGMSVQEAVEGSRLYMLDYHDIFLPFLDRINAQDGRKAYGTRAVFFLTAAGTLKP
IAIELCLPPMTDGCKRAKRVFTPPADATSNWLWQLAKAHVCSNDAGVHQLINHWLRTHACMEPFIIAAHRQMSAMHPIFKLLKPHMRYTLKINALARQIL
INGDGVIESGFTPGNVCMEMSAFAYRELWRLDQEGLPADLIRRYTSKCLRSCSDHNAVRVQRRWLNLFGVWLCRVEAWPWRTRASRTGYGCSSRTTRTPP
TGCSSGRRSRGGARRTWRPTTRATRPCRRTTSCSRGTPRPCRAGTRTSAARRGGRASRRPATWPPCSPPWCGSARRSTRRSTSGSTRSVATSRTARR

GO Analysis
1
GO Category Biological Process
GO Term flower development
2
GO Category Biological Process
GO Term multicellular organismal development
3
GO Category Biological Process
GO Term response to biotic stimulus
4
GO Category Molecular Function
GO Term binding
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Cellular comBiological Processonent
GO Term plastid
7
GO Category Molecular Function
GO Term catalytic activity
8
GO Category Biological Process
GO Term response to abiotic stimulus
9
GO Category Biological Process
GO Term response to stress
10
GO Category Biological Process
GO Term response to endogenous stimulus
11
GO Category Biological Process
GO Term biosynthetic process
12
GO Category Biological Process
GO Term cellular process
13
GO Category Biological Process
GO Term lipid metabolic process
14
GO Category Biological Process
GO Term growth
Presence of Splice variants No