LOC_Os04g35560

Expression Profile

RGAP LOCUS ID LOC_Os04g35560
RAP-DB ID Os04g0435500
Function glutathione S-transferase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 12

2) CELLO Prediction
localization Cytoplasmic
score 1.238

3) NUCPRED Prediction
localization Non Nuclear
score 0.14

4) Y-Loc Prediction
localization Chloroplast
score 4
confidence value 0.17
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsTCHQD1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.14
NLS score -0.47
Protein Sequence >LOC_Os04g35560.1 protein
MQLYHHPYSLDSQKVRMALEEKGIDYTSYHVNPLTGKNMNVAFFRMNPSAKLPVFQNGAHVIYRAFDIIQYLDRLSVHLSGEIVPVNTEVYQWMQKVDSW
NPKMFTLTHTPIKYRTFVSKFIRRVLIARMAEAPDLASMYHAKLREAYETEDKLKDPDIMKQSEEELSKLLDDVEAQLNNGKYLAGDEFSPADSVFIPIL
ARITLLDLDEEYINCRPRLLEYYTLVKQRPSYKVAIGKFFGGWKKYRTLFKTSFFLCVRTLFRKY

GO Analysis
1
GO Category Biological Process
GO Term catabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES