LOC_Os04g35060

Expression Profile

RGAP LOCUS ID LOC_Os04g35060
RAP-DB ID Os04g0429800
Function nicotinate phosphoribosyltransferase family domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 9

2) CELLO Prediction
localization Cytoplasmic
score 1.277

3) NUCPRED Prediction
localization Non Nuclear
score 0.15

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.54
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNaPRT2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.11
NLS score -0.04
Protein Sequence >LOC_Os04g35060.1 protein
MAAVAGSASAGANGSAAAHRVGAPTNPMATALLTDQYQFSMAYAYWKAGKHADRAVFDLYFRKNPFGGEFTVFAGLEECIKFIANFKFTEDDILFLQSVM
PMCEDAFFDYLRKTDCSDVEVYSIPEGSVVFPKVPLMRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRHVAGKSKVLLEFGLRRAQGPDGAISASKY
CFMGGFDATSNVLAGNLFGIPLRGTHSHAYVSSYMSLDEIPDKSLKSKDGSRVCKDFVSLVKEWLQKIQLADSLCGVFGETNQSELAAFASYALAFPTNF
LALVDTYDVMRSGIPNFCAVALALHDLGYKASGIRLDSGDLAYLSIEARKVFRTLEKEFNVPAFGKMIITASNDLNEETIDALNKQGHEVDSFGIGTYLV
TCYSQAALGCVFKLVEINSRPRIKLSEDVAKVSIPCKKRCFRLYGKEGYPLVDIMMRESEPSPKAGERILCRHPFLESKRAYVVPQHVEELLQCYWPGTS
NKPRVELPSLEEIRGRCMQQLEKLRPDHIRRLNPTPYKVSVSAKLYEFIHSLWLNEAPVGELQ

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Molecular Function
GO Term transferase activity
Presence of Splice variants No