LOC_Os04g32920
| RGAP LOCUS ID | LOC_Os04g32920 | ||||
| RAP-DB ID | Os04g0401700 | ||||
| Function | potassium transporter, putative, expressed | ||||
Sub-cellular Localization Predictions |
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1) WoLF-PSORT Prediction |
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| localization | plas | ||||
| score | 12 | ||||
2) CELLO Prediction |
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| localization | PlasmaMembrane | ||||
| score | 4.935 | ||||
3) NUCPRED Prediction |
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| localization | Non Nuclear | ||||
| score | 0.11 | ||||
4) Y-Loc Prediction |
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| localization | Chloroplast | ||||
| score | 9 | ||||
| confidence value | 0.36 | ||||
| Number Of Software Predicting Nucleus | 0 | ||||
| Seed Specific | No | ||||
| Transcription factor category | |||||
Experimental evidence for subcellular localization |
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| Published gene name (updated 1 January 2020) | OsHAK1 | ||||
| Function assigned as per literature | OsHAK1 plays an essential role in potassium (K)mediated rice growth and salt tolerance over low and high K concentration ranges | ||||
| Subcellular localization as per literature | Plasma membrane | ||||
| Cells used for localization experiment | Onion epidermal cells | ||||
| NUCLEAR or Not Nuclear | NOT NUCLEAR | ||||
| PMID | 26046301 | ||||
| Reference of localization | https://onlinelibrary.wiley.com/doi/pdf/10.1111/pce.12585 | ||||
| Is Subcellular localization evidence by author available ? | No | ||||
Sequence Analysis |
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| Number of PAT4 | 1 | ||||
| Number of PAT7 | 1 | ||||
| Number of Bipartite | 0 | ||||
| Basic residues % | 0.09 | ||||
| NLS score | 0.21 | ||||
| Protein Sequence | >LOC_Os04g32920.1 protein MSSALEVEGSGSPGVEPAATATASRLKRHDSLFGDAEKVSGGKHHGGSAVSWAVTLHLAFQSVGIIYGDIGTSPLYVYSSTFPDGIGHRDDLVGVLSLIL YTLIIIPMLKYVFIVLYANDNGDGGTFALYSLISRYAKIRMIPNQQAEDAMVSNYSIEAPSSQLRRAQWVKHKLESSRAAKMALFFLTILGTSMVMGDGT LTPAISVLSAVSGIREKAPNLTQTQVVLISVAILFMLFSVQRFGTDKVGYTFAPIISVWFLLIAGIGLYNLVVHEITILKAFNPWYIVQYFRRNGKKGWV SLGGVVLCVTGTEGMFADLGHFNIRAVQISFNCILFPSVALCYIGQAAYLRKFPENVSDTFYKSIPGKYRDRLNFGPLFWPTFIVAILAAIIASQAMLSG AFAILSKALSLGCLPRVRVIHTSKKYEGQVYIPEVNFMMGLASIIVTIAFRTTTSIGNAYGICVVTTFMVTTHLMTVVMLLIWKKHLVFILLFYCVFGFT EVVYLSSILSKFVDGGYLPFCFAMVLMTMMATWHYVHVRRYWYELDHIVPTAELASLLEENGGVRRVPGVGLLYTELVQGIPPLFPRLVRKIPSVHAVFV FISIKHLPIPHVAAAERFLFRQVGPRARRVFRCVARYGYTDALEEPREFAAFLVDGLKMFIQEESAFAPHQEMIDAAADDDDEAAARPRRSTSSAVHSEE AIQAASSGRTTASSVQLQAGGEPPAAMDVEEEKRLIDREVGRGVVYLMGEANVSAGPNSSILKRIAVNYIYTFLRKNLTEGHRALAIPNDQLLKVGITYE I |
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GO Analysis |
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| Presence of Splice variants | YES | ||||