LOC_Os04g30780

Expression Profile

RGAP LOCUS ID LOC_Os04g30780
RAP-DB ID Os04g0376500
Function eukaryotic translation initiation factor 3 subunit H, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Nuclear
score 2.037

3) NUCPRED Prediction
localization Non Nuclear
score 0.6

4) Y-Loc Prediction
localization Cytoplasm
score 95
confidence value 0.56
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) EIF3H
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.095
NLS score -0.47
Protein Sequence >LOC_Os04g30780.1 protein
MANPAAAAGPSGGARSFLQAVSTVTEEAPSPLRVVQMEGLAVLKIIKHCEEFAPALVTGQLLGLDVGSVLEVTNCFPFPMREDDEEADADGANYQLEMMR
CLREVNVDNNTVGWYQSCLLGSFQTVELIETFMNYQENIRRCVCIVYDPSRSNQGVLALKALKLTDSFMDLYRNNGLTGEKLREKKLSWVDIFEEIPIKV
SNSALVSAFMTELEPESPVSQCDFDRLKLSTAPFMERNLEFLIGCMDDLSSEQNKFQYYYRNVSRQQSQQQAWLQKRRQENMARKAAGEEPLPEEDPSNP
IFKPIPEPSRLEGYLVTNQISSYCNHINGVAGQNFNRLYLMKALQED

GO Analysis
1
GO Category Biological Process
GO Term translation
2
GO Category Molecular Function
GO Term translation factor activity, nucleic acid binding
3
GO Category Cellular comBiological Processonent
GO Term cytosol
4
GO Category Cellular comBiological Processonent
GO Term cytoplasm
Presence of Splice variants YES