LOC_Os04g23890

Expression Profile

RGAP LOCUS ID LOC_Os04g23890
RAP-DB ID Os04g0304200
Function AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 9

2) CELLO Prediction
localization Nuclear
score 1.224

3) NUCPRED Prediction
localization Non Nuclear
score 0.78

4) Y-Loc Prediction
localization Cytoplasm
score 81
confidence value 0.03
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNPH1b
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.128
NLS score -0.16
Protein Sequence >LOC_Os04g23890.2 protein
MAGSSSSKEIVDAVEKWMAFPTSGGGGATAGLEIVAEDAPSGSSGAHQQQAWRPVAPATAGRDSGGTGSGKSSVDGGVGRASHDSLPRVSQELKDALSSL
QQTFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNCRFLQGPDTDAAEVAKIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFIG
MQVEVSKYTEGLSDKRMRPNELPVSLIRYDERQKDKAMSSMTEVVQTVKQPRGARAPADAALLTPPKMSDADKMAAMSPVVAPGTPSGGGGGAGSFKSPL
WDLKKEESRLSRLASGRKSGRSSLMGFKIGKRSSVGSREAPAVVEEPAPAPPPAPEVVERTDSWERAEREKDIRQGIDLATTLERIEKNFVITDPRIPDN
PIIFASDSFLELTEYTREEILGRNCRFLQGPETDQGTVDKIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRN
RLSENTEIQSAKLVKATAENVDDAVRELPDANLRPEDLWAIHSMRVSPKPHKRNNPSWIAIEKATNLGEKIGLKHFKPVKPLGCGDTGSVHLVELQGSGE
LFAMKAMDKSVMLNRNKVHRACIEREIYALLDHPFLPTLYTSFQTPTHVCLITDFCPGGELFAVLDRQPMKIFREECARFYAAEVVIGLEYLHCLGIIYR
DLKPENILLQADGHIVLTDFDLSFLTTSKPHVIKNSTSLKRRRSQEFLPPTFVSEPSTPSNSFVGTEEYIAPEVITGAGHTSAIDWWALGILLYEMLYGR
TPFRGKNRKKTFYNILHKDLTFPSSIPVSLAAKQLIHGLLQRDPSNRIGSNAGANDIKQHSFFQDINWPLIRCMSPPELDVPLKLIGKETQPKAKPDEDV
PLNLDTF

GO Analysis
1
GO Category Molecular Function
GO Term receptor activity
2
GO Category Molecular Function
GO Term signal transducer activity
3
GO Category Cellular comBiological Processonent
GO Term membrane
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Biological Process
GO Term cellular process
6
GO Category Biological Process
GO Term response to abiotic stimulus
7
GO Category Biological Process
GO Term cellular component organization
8
GO Category Biological Process
GO Term signal transduction
9
GO Category Cellular comBiological Processonent
GO Term plasma membrane
10
GO Category Molecular Function
GO Term kinase activity
11
GO Category Molecular Function
GO Term protein binding
12
GO Category Biological Process
GO Term protein modification process
13
GO Category Biological Process
GO Term transport
14
GO Category Cellular comBiological Processonent
GO Term Golgi apparatus
15
GO Category Molecular Function
GO Term nucleotide binding
16
GO Category Biological Process
GO Term tropism
Presence of Splice variants YES