LOC_Os04g17660

Expression Profile

RGAP LOCUS ID LOC_Os04g17660
RAP-DB ID Os04g0249600
Function rhodanese-like domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization extr
score 8

2) CELLO Prediction
localization Extracellular
score 1.329

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.75
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsHAC1;2
Function assigned as per literature OsHAC1;2 is an arsenate reductase that play an important role in restricting As accumulation in rice shoots and grain.
Subcellular localization as per literature Cytoplasm and Nucleus
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 27702843
Reference of localization https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100750/
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.078
NLS score -0.47
Protein Sequence >LOC_Os04g17660.2 protein
MMMMVRLPAMFVICILAVPLLPALGSEPPSTPVPTVGVTAASHLVGSGGHSYLDVRTEEEFKKGHVENSLNVPFLFFTPQGKEKNTKFIEQVALHYDKED
NIIVGCLSGVRSELASADLIAAGFKNVKNMEGGYMAWVENGLAVNKPLVQEEL

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term transferase activity
3
GO Category Cellular comBiological Processonent
GO Term cytoplasm
4
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES