LOC_Os04g10750

Expression Profile

RGAP LOCUS ID LOC_Os04g10750
RAP-DB ID Os04g0186400
Function inorganic phosphate transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 8

2) CELLO Prediction
localization PlasmaMembrane
score 4.901

3) NUCPRED Prediction
localization Non Nuclear
score 0.09

4) Y-Loc Prediction
localization Cytoplasm
score 83
confidence value 0.45
Number Of Software Predicting Nucleus 0
Seed Specific Yes
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPht1;4|OsPT4
Function assigned as per literature OsPT4 encodes a plasma membrane-localized Pi transporter that facilitates acquisition and mobilization of Pi, and also plays an important role in development of the embryo in rice.
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25702710
Reference of localization https://onlinelibrary.wiley.com/doi/epdf/10.1111/tpj.12804
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.082
NLS score -0.47
Protein Sequence >LOC_Os04g10750.2 protein
MAGELKVLNALDSAKTQWYHFTAIVIAGMGFFTDAYDLFSISLVTKLLGRIYYFNPASKSPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVY
GMTLMLMVICCLASGLSFGSSAKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGNLTGGIVAIIVSAAFKSRFDAPAYRD
DRTGSTVPQADYAWRIVLMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMTQVLNVEIVEEQEKADEVARREQFGLFSRQFLRRHGRHLLGTTV
CWFVLDIAFYSSNLFQKDIYTAVQWLPKADTMSALEEMFKISRAQTLVALCGTIPGYWFTVFFIDIIGRFVIQLGGFFFMTAFMLGLAVPYHHWTTPGNH
IGFVVMYAFTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGSFGFLYAAQSTDASKTDAGYPPGIGVRNSLFFLAGCNVIGFFFTFLV
PESKGKSLEELSGENEDDDDVPEAPATADHRTAPAPPA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Biological Process
GO Term transport
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term transporter activity
6
GO Category Cellular comBiological Processonent
GO Term cellular_component
7
GO Category Biological Process
GO Term response to endogenous stimulus
8
GO Category Cellular comBiological Processonent
GO Term vacuole
9
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES