LOC_Os04g08740

Expression Profile

RGAP LOCUS ID LOC_Os04g08740
RAP-DB ID Os04g0169100
Function ethylene receptor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 9

2) CELLO Prediction
localization PlasmaMembrane
score 3.599

3) NUCPRED Prediction
localization Non Nuclear
score 0.21

4) Y-Loc Prediction
localization Cytoplasm
score 49
confidence value 0.08
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category Orphans

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ETR2|Os-ERL1|OsETR2
Function assigned as per literature OsETR2 has role in ric eplant submergence
Subcellular localization as per literature Endoplasmic reticulum
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28758833
Reference of localization https://www.tandfonline.com/doi/full/10.1080/15592324.2017.1356532
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.094
NLS score -0.47
Protein Sequence >LOC_Os04g08740.1 protein
MPPIPSLWIRVFFSWLLLSLPAAAAADFSHCGGCDDGDGGGGIWSTDNILQCQRVSDFLIAMAYFSIPLELLYFATCSDLFPLKWIVLQFGAFIVLCGLT
HLITMFTYEPHSFHVVLALTVAKFLTALVSFATAITLLTLIPQLLRVKVRENFLRIKARELDREVGMMKRQEEASWHVRMLTHEIRKSLDRHTILYTTMV
ELSKTLELQNCAVWMPSESGSEMILTHQLRQMETEDSNSLSIAMDNPDVLEIKATKDAKVLAADSALGIASRGKLEAGPVAAIRMPMLKASNFKGGTPEV
METSYAILVLVLPEDGSLGWGEEELEIVEVVADQVAVALSHAAVLEESQLMREKLAAQHRDLLRAKHETTMATEARNSFQTAMYDGMRRPMHSILGLVSM
MQQENMNPEQRLVMDAIVKTSSVASTLMNDVMQTSTVNREYLSLVRRAFNLHSLVKEAISVVRCLTGCKGIDFEFEVDNSLPERVVGDEKRVFHIVLHMV
GTLIQRCNAGCLSLYVNTYNEKEERHNQDWMLRRANFSGSYVCVKFEIRIRESRGNLLSSSSSRRLQGPNSTSSEMGLSFNMCKKIVQMMNGNIWSVSDS
KGLGETIMLALQFQLQHVTPVSGASSDLFRSAPIPNFNGLQVILVDSDDTNRAVTHKLLEKLGCLVLSVTSGIQCINSFASAESSFQLVVLDLTMRTMDG
FDVALAIRKFRGNCWPPLIVALAASTDDTVRDRCQQAGINGLIQKPVTLAALGDELYRVLQNN

GO Analysis
1
GO Category Molecular Function
GO Term binding
2
GO Category Biological Process
GO Term signal transduction
3
GO Category Biological Process
GO Term response to endogenous stimulus
4
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
5
GO Category Molecular Function
GO Term receptor activity
6
GO Category Biological Process
GO Term protein modification process
7
GO Category Molecular Function
GO Term kinase activity
8
GO Category Molecular Function
GO Term protein binding
Presence of Splice variants YES