LOC_Os04g08034

Expression Profile

RGAP LOCUS ID LOC_Os04g08034
RAP-DB ID Os04g0162100
Function ZOS4-02 - C2H2 zinc finger protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 11

2) CELLO Prediction
localization Nuclear
score 4.204

3) NUCPRED Prediction
localization Non Nuclear
score 0.79

4) Y-Loc Prediction
localization Nuclear
score 100
confidence value 0.98
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsEMF2a
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.119
NLS score -0.47
Protein Sequence >LOC_Os04g08034.2 protein
MPGLPLTDHDAVNTGCEFDCQRSSDQMCCEHSVAQFSSDQQLNPEENLALYCKPLELYNFIRHRAIENPPYLQRCLLYKIRAKQKKRIQITISLPGSNNK
ELQAQNIFPLYVLFARPTSNVPIEGHSPIYRFSQARLLTSFNDSGNNDRAEATFVIPDLETLIATQAYGLTFILVSRGTKKNKGRTGQNLCENDCSEKHV
DYSSLRKLAGKCFWGKIPITLLNSSLETCADLILGHIVESPISICMSPGYLEPTFLEHDNCLSFCSRKADAMVPYQLQVKVSAAEAGAKDILKSPYNSFS
YSDVPPSLLLRIVRLRVGNVLFNYKNTQMSEVTEDFTCPFCLVRCGNFKGLECHMTSSHDLFHYEFWISEDYQAVNVTLKKDNMRTEFVAAEVDNSHRIF
YYRSRFKKSRTEILPVARADAHIMESGSPEETQAESEDDVQEENENALIDDSKKLHGSNHSQSEFLAFGKSRKLSANRADPRNRLLLQKRQFIHSHKAQP
MTFEEVLSDNDSEDEVDDDIADLEDRRMLDDFVDVTKDEKRIMHMWNSFIRKQSILADSHVPWACEAFSRHHGEELLENSALLWGWRMFMIKLWNHSLLS
ARTMDTCNRILDDIKNERSDPKKQ

GO Analysis
1
GO Category Biological Process
GO Term flower development
2
GO Category Molecular Function
GO Term DNA binding
3
GO Category Cellular comBiological Processonent
GO Term nucleus
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Biological Process
GO Term biosynthetic process
6
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
7
GO Category Biological Process
GO Term regulation of gene expression, epigenetic
8
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants YES