LOC_Os04g01690

Expression Profile

RGAP LOCUS ID LOC_Os04g01690
RAP-DB ID Os04g0107600
Function pyridoxal-dependent decarboxylase protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 5

2) CELLO Prediction
localization Cytoplasmic
score 2.431

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Chloroplast
score 4
confidence value 0.17
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ADCa|OsAdc2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.096
NLS score 0.02
Protein Sequence >LOC_Os04g01690.3 protein
MAKKNYGQVYNILGWGDPYFTVNSHGHLAVKPHGRDTMSGQDIDVHSVIHRALATTITTNDGDKKPQFPMILRFPDVLKNRLDSLHAAFHGAVDSTGYAS
RYQGVFPIKVNQNKAVVQDLVTFGHGYSYGLEAGSKPELLIAMSCLAKAKPGAYLVCNGYKDADYVALALSARAMGLNAIIVLEMEEELDIVVEQSARLG
VEPVIGVRAKLLTKIPGHFGSTAGKHGKFGMLADKIYEVAGKLKKMGKLHWLKLLHYHVGSMIPTTDIVYNAAAEAAGIYCALVKEHGATGMTTLDCGGG
LGVDYDGTRSGSSDMSVAYGLEQYASSIVQAVRLTCDDNGVPHPVLCTESGRAMASHHSMIILEALSAIPEPQDEEDTHHRLLSKIQDLSSKQPRTAHTV
NGGGGVDAMHSHAVELKKHGIEMYKLAKKLSKRVTGDANGIYNYHMNLSVFSLVPDFWGIGQLFPMMPVSRLNEKPTINGTLVDITCDSDGKVEKFIRDA
VTLPLHPLDDAAAEHGGYYVAALLSGAYQEALACKHNLFSGPTLVRVESAGGGGAFKIVSVELGPTAEEVIGTMRYDVKNDISDVIEKVATENGVWPMVE
PLMKKGLTTMPYLNDYKPPKTTF

GO Analysis
1
GO Category Biological Process
GO Term reproduction
2
GO Category Biological Process
GO Term post-embryonic development
3
GO Category Biological Process
GO Term response to stress
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Biological Process
GO Term response to abiotic stimulus
6
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants YES