LOC_Os03g63970

Expression Profile

RGAP LOCUS ID LOC_Os03g63970
RAP-DB ID Os03g0856700
Function gibberellin 20 oxidase 1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization Cytoplasmic
score 1.15

3) NUCPRED Prediction
localization Non Nuclear
score 0.21

4) Y-Loc Prediction
localization Cytoplasm
score 92
confidence value 0.89
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGA20ox1|GNP1|SDSFL1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.11
NLS score -0.47
Protein Sequence >LOC_Os03g63970.1 protein
MSMVVQQEQEVVFDAAVLSGQTEIPSQFIWPAEESPGSVAVEELEVALIDVGAGAERSSVVRQVGEACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLP
LGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRR
HYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPR
RSLAFFLCPEMDTVVRPPEELVDDHHPRVYPDFTWRALLDFTQRHYRADMRTLQAFSDWLNHHRHLQPTIYS

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term anatomical structure morphogenesis
3
GO Category Biological Process
GO Term cell growth
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Biological Process
GO Term response to endogenous stimulus
6
GO Category Biological Process
GO Term metabolic process
7
GO Category Cellular comBiological Processonent
GO Term cytoplasm
8
GO Category Biological Process
GO Term biosynthetic process
9
GO Category Biological Process
GO Term cellular process
10
GO Category Biological Process
GO Term lipid metabolic process
11
GO Category Biological Process
GO Term reproduction
12
GO Category Biological Process
GO Term response to abiotic stimulus
13
GO Category Biological Process
GO Term post-embryonic development
14
GO Category Biological Process
GO Term flower development
15
GO Category Biological Process
GO Term signal transduction
16
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants No