LOC_Os03g63920
| RGAP LOCUS ID | LOC_Os03g63920 |
| RAP-DB ID | Os03g0856200 |
| Function | KAP-2, putative, expressed |
Sub-cellular Localization Predictions |
|
1) WoLF-PSORT Prediction |
|
| localization | chlo |
| score | 6 |
2) CELLO Prediction |
|
| localization | Nuclear |
| score | 2.062 |
3) NUCPRED Prediction |
|
| localization | Non Nuclear |
| score | 0.42 |
4) Y-Loc Prediction |
|
| localization | Cytoplasm |
| score | 53 |
| confidence value | 0.62 |
| Number Of Software Predicting Nucleus | 1 |
| Seed Specific | No |
| Transcription factor category | |
Experimental evidence for subcellular localization |
|
| Published gene name (updated 1 January 2020) | OsKu80|Ku80 |
| Function assigned as per literature | OsKu80 plays a role in developmental growth and telomere length regulation in rice plants |
| Subcellular localization as per literature | Nucleus when interacted with OsKu70 |
| Cells used for localization experiment | Tobacco leaves |
| NUCLEAR or Not Nuclear | NUCLEAR |
| PMID | 26590017 |
| Reference of localization | https://www.sciencedirect.com/science/article/pii/S0006291X15309141 |
| Is Subcellular localization evidence by author available ? | No |
Sequence Analysis |
|
| Number of PAT4 | 3 |
| Number of PAT7 | 3 |
| Number of Bipartite | 1 |
| Basic residues % | 0.142 |
| NLS score | 2.29 |
| Protein Sequence | >LOC_Os03g63920.1 protein MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELAKELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLD AIVVGLDMLIRKFGNIKGKQRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRESGVRHNAVMDENDQLLYHFRERSVTKVVHVDSPTS LLGALRTRNVLPVTVFRGDLEVSSSFKIKVWVYKKTSEEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPISSAE WEAVKFKPEKGVKLLGFTDRSSISRHYFMKDVFSFVPEPGNTKAVAAVSALARAMSEMNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILP FAEDIREFQFRSFSSLPSSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKSKQPDANVPPLDKCLKKITEPDPDVIDYQAPL IKKLGNVFELKENPKKKKARTQDRLTYTGADDQAKLLEEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFEAMLTQRSSSTWVQTAIEEMQKYITALIQD SCDRDNHQKALECLVALRKACIIEQEPNEYNGFVTKLCQKFRPAGDKIFLQLLSSKKASLISKEEAPDSDVTEEMARNFCLKPEPSSQ |
GO Analysis |
|
| Presence of Splice variants | No |