LOC_Os03g62500

Expression Profile

RGAP LOCUS ID LOC_Os03g62500
RAP-DB ID Os03g0841800
Function CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Cytoplasmic
score 2.119

3) NUCPRED Prediction
localization Non Nuclear
score 0.22

4) Y-Loc Prediction
localization Cytoplasm
score 90
confidence value 0.47
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) qTGW3|TGW3|GL3.3|OsGSK5|OsSK41
Function assigned as per literature OsGSK5 has role in rice grain development 
Subcellular localization as per literature Cytoplasm and Nucleus
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 29567449
Reference of localization https://www.cell.com/molecular-plant/fulltext/S1674-2052(18)30091
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.123
NLS score -0.47
Protein Sequence >LOC_Os03g62500.1 protein
MAYSGLRHGGVGSSSRPGHGFKGPASSVECLGREMLEMQLRDSKPDVGDEKNTERDVVDGSSAEAGHIIATTIRGRNGLPKQSVTYIAEHVVGTGSFGVV
YQAKCRETGEIVAIKKVLQDKRYKNRELQIMHMLDHPNIVGLKHYFFSTTERDELYLNLVLEYVPETVNRIARQYSRMNQRVPLIYVKLYTYQICRALAY
IHNCVGICHRDIKPQNVLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDLWSTGCVMAELLLGQPLFPGESGVDQLVEII
KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFQKRLPPEAVDLVSRFLQYSPNLRCTAMEACMHPFFDELRDPNTRLPNGRPLPPLFNFRTQELNGI
PPEAIERLVPEHARRQSLFMALRT

GO Analysis
1
GO Category Molecular Function
GO Term kinase activity
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Molecular Function
GO Term nucleotide binding
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No