LOC_Os03g62110

Expression Profile

RGAP LOCUS ID LOC_Os03g62110
RAP-DB ID Os03g0837300
Function nicotinate phosphoribosyltransferase family domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization PlasmaMembrane
score 1.904

3) NUCPRED Prediction
localization Non Nuclear
score 0.14

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.51
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNaPRT1
Function assigned as per literature OsNaPPRT1 triggers premature leaf senescence due to transcriptional activation of senescence-related genes.
Subcellular localization as per literature Nucleus
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 27208230
Reference of localization http://www.plantphysiol.org/content/plantphysiol/171/2/1085.full.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.102
NLS score -0.04
Protein Sequence >LOC_Os03g62110.2 protein
MAAAAAAAANGAGGGGGVPRPTNPMVTPLLTDLYQFTMAYAYWKAGKHLDRAVFDLYFRKNPFGGEFTIFGGLEECIRFIANFKLTDTEITFLRSAMPTC
EDGFFEYLSSIDCSDVEVYAIPEGSVVFPKVPLMIIEGPVAVIQLLETPFLSLVNYASLVTTNAARHRLVAGKSKNLLEFGLRRAQGPDGGISASRYCYM
GGFDATSNVAAGWLFGIPIRGTHSHAFVSSFMGLDDIIDRTLASSDGSNKCEDFVSLVQNWLARIKDAGSLRGTFRETNLSELAAFTSYALAFPNSFLAL
VDTYDVMRSGVPNFCAVALALNDMGYKAAGIRLDSGDLAYLSVETRKFFRAIEEEFGFIGFGKMNITASNDLNEETIDALNKQGHEVDAFGIGTYLVTCY
AQAALGCVFKLVEINKQPRIKLSEDVTKVSIPCKKRCYRLFGKEGYPLVDIMTGEDEPAPKVGERLLCRHPFNESKRAYVVPQHVEELLKCYWPGTTSEP
REELPSINEIRSRCMGYLDRMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Molecular Function
GO Term transferase activity
Presence of Splice variants YES