LOC_Os03g61950

Expression Profile

RGAP LOCUS ID LOC_Os03g61950
RAP-DB ID Os03g0835800
Function kelch motif family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Cytoplasmic
score 1.499

3) NUCPRED Prediction
localization Non Nuclear
score 0.32

4) Y-Loc Prediction
localization Cytoplasm
score 64
confidence value 0.21
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) GPA3
Function assigned as per literature GPA3 has role in vacuolar protein sorting in rice endosperm
Subcellular localization as per literature Cytoplasm
Cells used for localization experiment Arabidopsisprotoplasts.
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 24488962
Reference of localization http://www.plantcell.org/content/plantcell/early/2014/01/31/tpc.113.121376.full.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.092
NLS score -0.47
Protein Sequence >LOC_Os03g61950.1 protein
MTPQLQPKQMHWARADSSDFGGQIPAPRSGHTAVSIGKSKVVVFGGFADKRFLSDIAVYDVENRIWYTPECNGSGSDGQAGPSPRAFHVAIVIDCNMFIF
GGRSGGKRLGDFWMLDTDIWQWSELTGFGDLPSPREFAAASAIGNRKIVMYGGWDGKKWLSDVYIMDTMSLEWTELSVTGSVPPPRCGHSATMIEKRLLV
FGGRGGAGPIMGDLWALKGVTEEDNETPGWTQLKLPGQSPSPRCGHSVTSGGPYLLLFGGHGTGGWLSRYDVYYNECIILDRVSVQWKLLATSNEPPPPR
AYHSMTCIGSRFLLFGGFDGKNTFGDLWWLVPEGDPIAKRDLVPNVDSDSKPSNVTGGAQHSASQESQAGESPMIDLAKRLGISLSLEASASFVDEINDK
ELIELSSMLFGESPPTGDQHACIQALRDHWTSIPANSIQLQELGPLLRDYQRLILRRYLENSFTSFYEKEVHRFFHLKNASELRMDDIPILLMEYGKLLS
T

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES