LOC_Os03g61200

Expression Profile

RGAP LOCUS ID LOC_Os03g61200
RAP-DB ID Os03g0827500
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear_plas
score 5.5

2) CELLO Prediction
localization Nuclear
score 2.062

3) NUCPRED Prediction
localization Non Nuclear
score 0.39

4) Y-Loc Prediction
localization Nuclear
score 85.4
confidence value 0.93
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSPX4
Function assigned as per literature SPX4 negatively regulates phosphate signaling and homeostasis
Subcellular localization as per literature Nucleus and cytoplasm
Cells used for localization experiment Rice protoplasts and roots of the transgenic seedling
NUCLEAR or Not Nuclear NUCLEAR
PMID 24692424
Reference of localization http://www.plantcell.org/content/26/4/1586.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.125
NLS score -0.47
Protein Sequence >LOC_Os03g61200.1 protein
MKFGKDFRSHLEETLPAWRDKYLAYKSLKKLIKNLPPDGDPPPVAAAAEVPAGDGDGDGGIALGNWFARVLDMELQKLNDFYIEREEWYVIRLQVLKERI
ERVKAKKNGAFTSKSEFTEEMLEIRKAFVIIHGEMILLQTYSSLNFAGLVKILKKYDKRTGGLLSLPFTQRARHQPFFTTEPLTRLVRECEANLELLFPI
EAEVLESASSSAKLQPQNDDAASHDPASSVDVETSDVYRSTLAAMKAIQGLRKASSTYNPLSLARFFHGEDGEACSGAITSESDSYSDSQIEDAEDDDKE
VQSREQNTAQNAAEGQPRDE

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term response to extracellular stimulus
4
GO Category Biological Process
GO Term cell communication
5
GO Category Biological Process
GO Term response to stress
Presence of Splice variants YES