LOC_Os03g61050

Expression Profile

RGAP LOCUS ID LOC_Os03g61050
RAP-DB ID Os03g0825700
Function FG-GAP repeat-containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 12

2) CELLO Prediction
localization Cytoplasmic
score 1.162

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Cytoplasm
score 47
confidence value 0.2
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsDEX1
Function assigned as per literature OsDEX1 plays an important role in the development of tapetal cells and pollen formation
Subcellular localization as per literature Endoplasmic reticulum
Cells used for localization experiment Tobacco epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 27663411
Reference of localization http://www.plantphysiol.org/content/172/3/1772.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.094
NLS score 0.21
Protein Sequence >LOC_Os03g61050.1 protein
MRPLLAFAAVCALLVAAAAPAAAEEEKANKFRQREATDDMLGYPHLDEDALLKTKCPKHVELRWQTEVSSSIYATPLIADINSDGKLEVVVPSFVHYLEV
LEGSDGDKLPGWPAFHQSNVHSSPLLYDIDKDGTREIVLATYNGVVNFFRVSGYMMMDKLEVPRRKVHKDWYVGLNTDPVDRSHPDVHDSSIAKKAASEE
SHPNIQDKPVVNESSKESQSRSTNDSTTRGVDSMKHASKEEPVESKPNSTRGQENMDVLNNLNSTDAGNNSSLSTTTENASHVQRRLLQTDEKSNQAGSS
ETDASDTGTAKAATVENSEPLEADADASFNLFRDVEDLPDEYNYDYDDYVDETMWGDEDWKEQQHEKAEDYVSIDAHILSTPVIADIDRDGIQEMVISVS
YFFDHEYYDKPEHLKELGGIDIGKYIASSIVVFNLDTRQVKWTAELDLSTDSGNFTAHAYSSPTVVDLDGDGNLDILVGTSFGLFYVIDHRGKVRNKFPL
EMAEIHAPVIAADINDDGKIEMVTADVHGNVAAWTAEGEEIWEVHLKSLIPQRPTVGDVNGDGRTEVVVPTVSGNIYVLSGKDGSKIQPFPYRTHGRIMS
PVLLLDMSKHDEKSKGLTLATTSFDGYLYLIEGSSGCADVVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKEWRSSNQGRNNAAY
RYNREGIYVKHGSRTFRDEEGKHFWVEFEIVDKYRVPYGNQAPYNVTVTLLVPGNYQGERRIVVNAAYNEPGKQRMKLPTVPVRTTGTVLVEMVDKNGFY
FSDEFSLTFHMHYYKLLKWLVLLPMLGMFSVLVILRPQEGAPLPSFSRNID

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Molecular Function
GO Term binding
3
GO Category Biological Process
GO Term anatomical structure morphogenesis
4
GO Category Biological Process
GO Term cellular component organization
5
GO Category Biological Process
GO Term multicellular organismal development
6
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No