| RGAP LOCUS ID |
LOC_Os03g60580 |
| RAP-DB ID |
Os03g0820500 |
| Function |
actin-depolymerizing factor, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
8 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
1.842 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.01 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
93 |
| confidence value |
0.6 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsADF3 |
| Function assigned as per literature |
OsADF gene family may participate in plant abiotic stresses response or tolerance and would facilitate functional validation of other OsADF genes. |
| Subcellular localization as per literature |
Nucleus |
| Cells used for localization experiment |
Onion epidermal cells |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
24279948 |
| Reference of localization |
https://thericejournal.springeropen.com/articles/10.1186/1939-8433-5-33 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.113 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os03g60580.1 protein
MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVS
WSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKDHTS |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 2 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
intracellular |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 4 |
| GO Category |
Molecular Function |
| GO Term |
protein binding |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
biological_process |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 7 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
mitochondrion |
|
| 8 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plasma membrane |
|
| 9 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plastid |
|
| Presence of Splice variants |
No |
