LOC_Os03g60190

Expression Profile

RGAP LOCUS ID LOC_Os03g60190
RAP-DB ID Os03g0816500
Function oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 9

2) CELLO Prediction
localization Nuclear
score 2.753

3) NUCPRED Prediction
localization Non Nuclear
score 0.53

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.67
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsALKBH1
Function assigned as per literature OsALKBH1 is potentially involved in 6mA demethylation in rice
Subcellular localization as per literature Nucleus and cytoplasm
Cells used for localization experiment Rice protoplasts cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 30061746
Reference of localization https://www.nature.com/articles/s41477-018-0214-x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.148
NLS score -0.47
Protein Sequence >LOC_Os03g60190.1 protein
MVGGGGGGGHGVRTPANFPPRQKARLPRGPVHEKSLEQQKKGPSSSSPSVSSNKSPLQLAAAIVQPQKPLESPQHMVTPVRLQESPGPRTIPCSSGSVGS
GSGAAPFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQYLRPGMVLLKKFLKHDDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCL
GKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKPSLHKGLPVVSFSL
GDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRIKPKTAPNWLTDEAKLRPGRLNLTFRQH

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term biological_process
4
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants YES