LOC_Os03g60080

Expression Profile

RGAP LOCUS ID LOC_Os03g60080
RAP-DB ID Os03g0815100
Function NAC domain-containing protein 67, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 9

2) CELLO Prediction
localization Nuclear
score 1.141

3) NUCPRED Prediction
localization Non Nuclear
score 0.13

4) Y-Loc Prediction
localization Nuclear
score 90.66
confidence value 0.78
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category NAC

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNAC19|SNAC1|OsNAC9
Function assigned as per literature induced by drought specifically in guard cells and holds promising utility in improving drought and salinity tolerance in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Rice root cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 16924117
Reference of localization http://www.pnas.org/content/103/35/12987
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.133
NLS score -0.04
Protein Sequence >LOC_Os03g60080.1 protein
MGMGMRRERDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKA
TGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEKMQQGKEVKEEASDMVTSQSHSHTH
SWGETRTPESEIVDNDPFPELDSFPAFQPAPPPATAMMVPKKESMDDATAAAAAAATIPRNNSSLFVDLSYDDIQGMYSGLDMLPPGDDFYSSLFASPRV
KGTTPRAGAGMGMVPF

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Biological Process
GO Term multicellular organismal development
4
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
5
GO Category Biological Process
GO Term response to stress
6
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No