| RGAP LOCUS ID |
LOC_Os03g58630 |
| RAP-DB ID |
Os03g0800700 |
| Function |
thioredoxin, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cyto |
| score |
8 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
2.152 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
82 |
| confidence value |
0.48 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsTrxh4 |
| Function assigned as per literature |
OsPHO2 is under redox control by thioredoxins, OsTrxh4 which fine-tune its activity and link Pi homeostasis with redox balance in rice. |
| Subcellular localization as per literature |
Cytoplasm and ER |
| Cells used for localization experiment |
rice protoplasts |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
27895204 |
| Reference of localization |
http://www.plantphysiol.org/content/plantphysiol/early/2016/11/28/pp.16.01639.full.pdf |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.119 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os03g58630.1 protein
MGSFFSTMFTPPPAADDGGDSRVVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCGPCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPT
FVLIKGGKEVSRVVGAKKDELERKVNMFISSSSS |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 3 |
| GO Category |
Molecular Function |
| GO Term |
catalytic activity |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
biosynthetic process |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
protein modification process |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 7 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
mitochondrion |
|
| 8 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plasma membrane |
|
| Presence of Splice variants |
No |
