LOC_Os03g58400

Expression Profile

RGAP LOCUS ID LOC_Os03g58400
RAP-DB ID Os03g0798300
Function C-5 cytosine-specific DNA methylase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization Mitochondrial
score 2.099

3) NUCPRED Prediction
localization Non Nuclear
score 0.47

4) Y-Loc Prediction
localization Nuclear
score 99.3
confidence value 0.93
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMet1-1|OsMET1a
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.128
NLS score -0.47
Protein Sequence >LOC_Os03g58400.1 protein
MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTF
RLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGA
GKPTIQYGSGPVSWFQKKIRSDMASLNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLSTGQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFP
TSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKQAIDAKR

GO Analysis
1
GO Category Biological Process
GO Term regulation of gene expression, epigenetic
2
GO Category Biological Process
GO Term DNA metabolic process
3
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
4
GO Category Molecular Function
GO Term transferase activity
5
GO Category Biological Process
GO Term flower development
6
GO Category Biological Process
GO Term biological_process
7
GO Category Biological Process
GO Term metabolic process
8
GO Category Biological Process
GO Term cellular process
9
GO Category Biological Process
GO Term reproduction
10
GO Category Biological Process
GO Term post-embryonic development
11
GO Category Biological Process
GO Term embryo development
12
GO Category Biological Process
GO Term cell cycle
Presence of Splice variants No