| RGAP LOCUS ID |
LOC_Os03g57220 |
| RAP-DB ID |
Os03g0786100 |
| Function |
hydroxyacid oxidase 1, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cyto |
| score |
7 |
2) CELLO
Prediction
|
| localization |
Peroxisomal |
| score |
2.626 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
95 |
| confidence value |
0.77 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
GLO1 |
| Function assigned as per literature |
GLO isozymes are coordinately controlled by GLO1 and GLO4 in rice, which is a key enzyme in photorespiratory metabolism |
| Subcellular localization as per literature |
Peroxisomes |
| Cells used for localization experiment |
Rice protoplasts and Arabidopsis protoplasts |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
22761858 |
| Reference of localization |
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0039658 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.119 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os03g57220.2 protein
MGEITNVMEYQAIAKQKLPKMIYDYYASGAEDEWTLKENREAFSRILFRPRILIDVSKIDMSATVLGFKISMPIMIAPSAMQKMAHPDGEYATARAASAA
GTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVEQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPYLTLKNFEGLDLAEMDKSNDSGL
ASYVAGQIDRTLSWKDVKWLQSITSLPILVKGVITAEDARLAVHSGAAGIIVSNHGARQLDYVPATISALEEVVTAAAGRIPVYLDGGVRRGTDVFKALA
LGAAGVFIGRPVVFALAAEGEAGVRNVLRMMREEFELTMALSGCTSLADITRAHIYTDADRLARPFPRL |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
membrane |
|
| 2 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
extracellular region |
|
| 3 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 5 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
peroxisome |
|
| 7 |
| GO Category |
Molecular Function |
| GO Term |
catalytic activity |
|
| 8 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
ribosome |
|
| 9 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 10 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plastid |
|
| Presence of Splice variants |
YES |
