LOC_Os03g56790

Expression Profile

RGAP LOCUS ID LOC_Os03g56790
RAP-DB ID Os03g0780400
Function actin-depolymerizing factor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Nuclear
score 1.781

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.68
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsADF2
Function assigned as per literature OsADF2 has role in conferring drought and salt tolerance in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 29851294
Reference of localization https://onlinelibrary.wiley.com/doi/full/10.1111/pbi.12957
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.138
NLS score -0.47
Protein Sequence >LOC_Os03g56790.1 protein
MAFMRSHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPST
SRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERAH

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Cellular comBiological Processonent
GO Term intracellular
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No