LOC_Os03g55850

Expression Profile

RGAP LOCUS ID LOC_Os03g55850
RAP-DB ID Os03g0767800
Function cold acclimation protein WCOR413, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 4.867

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Cytoplasm
score 70
confidence value 0.64
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Oscor413-pm1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.076
NLS score -0.47
Protein Sequence >LOC_Os03g55850.1 protein
MGKGFMSYLAMKTDAAGGEAAQAALIDADLQELGVAARKLANHALVLGGGLGFGTTFLKWLAFFAAVYLLILDRTNWKTNMLTALLVPYIFFTLPGGLFS
LLRGEIGKWIAIIAVILRLFFPRHFPDWLELPGAVILLIAVAPNLFASTFRGDLVGIFICLIIGCYLLQEHIRASGGFRNAFRKGNGVSNSIGILLLFIY
PVWALVLNFL

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Cellular comBiological Processonent
GO Term vacuole
4
GO Category Biological Process
GO Term response to stress
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No