LOC_Os03g55320

Expression Profile

RGAP LOCUS ID LOC_Os03g55320
RAP-DB ID Os03g0761100
Function protein phosphatase 2C, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Mitochondrial
score 2.461

3) NUCPRED Prediction
localization Non Nuclear
score 0.33

4) Y-Loc Prediction
localization Cytoplasm
score 83
confidence value 0.34
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsBIERF1|OsPP2C34
Function assigned as per literature OsPP2C34 is a positive regulator of the gibberellin -dependent signaling transduction pathway in rice
Subcellular localization as per literature Cytosol
Cells used for localization experiment Maize protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 30077370
Reference of localization https://www.sciencedirect.com/science/article/pii/S0006291X18316504
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.134
NLS score 0.02
Protein Sequence >LOC_Os03g55320.1 protein
MLRAVARCCGHWPPGAAAADGMLWQTELRPHAAGEFSMAAAQANLAMEDQAQVLASPAATLVGVYDGHGGADASRFLRSRLFPHVQRFEKEQGGMSTEVI
RRAFGAAEEEFLQQVRQAWRQRPKMAAVGSCCLLGAISGDTLYVANLGDSRAVLGRRVVGGGVAVAERLTDEHNAASEEVRRELTALNPDDAQIVVHARG
AWRVKGIIQVSRTIGDVYLKKQEYSMDPVFRNVGPPIPLKRPALSAEPSIQVRKLKPNDLFLIFASDGLWEHLSDDAAVQIVFKNPRTGIANRLVKAALK
EATRKREVSFRDLKTIEKGVRRHFHDDISVIVVYLDRHRGRRHTRVVDSSSNCTNAPVDIYSSNSGQSVETLQAHRGSGW

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term protein modification process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term catalytic activity
6
GO Category Cellular comBiological Processonent
GO Term mitochondrion
7
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants YES