LOC_Os03g55200

Expression Profile

RGAP LOCUS ID LOC_Os03g55200
RAP-DB ID Os03g0759500
Function ORC5 - Putative origin recognition complex subunit 5, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Nuclear
score 2.59

3) NUCPRED Prediction
localization Nuclear
score 0.85

4) Y-Loc Prediction
localization Nuclear
score 64.26
confidence value 0.12
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsORC5
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 3
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.122
NLS score 0.47
Protein Sequence >LOC_Os03g55200.1 protein
MSQPVTPRRTTRSSASASPSPAPASPTSPPKSRPKPSPRRQLLAAAAAPPKEDGSSADALLAELPGRRAQAMDILRLLAPAPALPLMLHGGAATGKTRAL
LLALRYLRPSQRLVYAALRSLPSPRALFASLLSQLSATPFSTSSRHRVPDKPSDFVAALRDALNGIVSQGEVVYLVFDNLEVVRSWDKGGQLLPLLLRLH
DLLQLPQVVLVYVSSATPDAYYSMTGSVEPNYVYFPDYTVDEVRDILMHDHPNPKLYSSFLSVALKPLFRVTRRVDELSAVLEPLFRRYCEPLGDLKAVP
DEGMKRRLFEHVQSHLAVALNETFNVPMRASMDEIKDGGSAGKGSAKRQFAGKDGLSSELEFHMSVSAKYLLLSAFLASRNPATLDAALFDSTGGLDNRK
RKRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPGNMASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSN
IDEDLALKVARSVNFPLSKYMYRR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term intracellular
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term DNA metabolic process
Presence of Splice variants No