| RGAP LOCUS ID |
LOC_Os03g54100 |
| RAP-DB ID |
Os03g0752300 |
| Function |
potassium channel protein, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
plas |
| score |
9 |
2) CELLO
Prediction
|
| localization |
PlasmaMembrane |
| score |
4.199 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.1 |
4) Y-Loc
Prediction
|
| localization |
Chloroplast |
| score |
4 |
| confidence value |
0.1 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsTPKa |
| Function assigned as per literature |
OsTPKa play an important role in maintaining K+ homeostasis |
| Subcellular localization as per literature |
tonoplast of the large LV |
| Cells used for localization experiment |
Rice protoplasts and Arabidopsis protoplasts |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
21224427 |
| Reference of localization |
http://www.plantcell.org/content/23/2/756.long |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
1 |
| Basic residues % |
0.118 |
| NLS score |
0.02 |
| Protein Sequence |
>LOC_Os03g54100.2 protein
MDDNSIQQSLLADNPNVLQRKPSEGVNRFRRCRSTPSTDPLQGPPEKGSSVKAKELFKEMRPSFRLVGLLLFIYLLVGVLAFYAVMDEISGKRTNRVLDA
LYFCVVTMTTVGYGDLVPNNDTTKLLACAFVFMGMAVVALFVSKVADYLVEKQEVLFFKALHTNLKGGETKMLRAIETNRIKYKFYTNALLLVLSIISGT
VFLWKVEKLSLVDSFYCVCATITTLGYGDKSFSSKLGRVFAVFWIITSTIIMAQFFMYLAEIYTERRQKMLANWVLTRKMTKMDLEAADLDDDRQVGAAE
FVVYKLKELGKINQEEISSFLEEFEKLDVDHSGTLSPYDLTLAQSAQ |
GO Analysis |
| 1 |
| GO Category |
Molecular Function |
| GO Term |
transporter activity |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
transport |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
cellular component organization |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
post-embryonic development |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
membrane |
|
| 7 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
vacuole |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
cellular homeostasis |
|
| Presence of Splice variants |
YES |
