LOC_Os03g54000

Expression Profile

RGAP LOCUS ID LOC_Os03g54000
RAP-DB ID Os03g0751100
Function oligopeptide transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 4.867

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Cytoplasm
score 74
confidence value 0.67
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OPT|OsOPT7
Function assigned as per literature  OsOPT7 may be involved in Fe transport in rice.
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25893776
Reference of localization https://link.springer.com/article/10.1007/s11103-015-0315-0
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.073
NLS score -0.47
Protein Sequence >LOC_Os03g54000.1 protein
MASLKSPVAAEEQAATAAAAAAKGEGERCPVEEVALVVPETDDPTTPVMTFRAWTLGLASCVVLIFLNTFFTYRTQPLTISGILAQILVLPAGQFMAAVL
PSREVRLLGGRLGSFNLNPGPFNIKEHVIITIFANCGVSYGGGDAYSIGAITVMKAYYKQSLSFLCALLIVLTTQILGYGWAGMLRRYLVDPADMWWPSN
LAQVSLFRALHEKEGGDGGKGSSSRGPTRMRFFLIFFFASFAYYALPGYLLPILTFFSWACWAWPHSITAQQVGSGYHGLGVGAFTLDWAGISAYHGSPL
VAPWSSIANTAAGFVMFIYLIVPLCYWKFDTFDARKFPIFSNQLFTASGQKYDTTKVLTREFDLNVAAYESYGKLYLSPLFAISIGSGFLRFTATIVHVA
LFHGGDIWRQSRSAMSSAAAKMDVHAKLMRRYKQVPQWWFLVLLVGSVAVSLVMSFVYREEVQLPWWGMLFAFALAFVVTLPIGVIQATTNQQPGYDIIA
QFMIGYALPGKPIANLLFKIYGRISTVHALSFLADLKLGHYMKIPPRCMYTAQLVGTVVAGVVNLAVAWWMLGSIDNICDVEALHPDSPWTCPKYRVTFD
ASVIWGLIGPARLFGRHGLYRNLVWLFLAGAVLPVPVWLLSRAFPEKKWIALINVPVISYGFAGMPPATPTNIASWLVTGTIFNYFVFKYRKGWWQKYNY
VLSAALDAGTAFMGVLIFFALQNAHHELKWWGTAVDHCPLASCPTAPGIAVKGCPVF

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular homeostasis
4
GO Category Cellular comBiological Processonent
GO Term cellular_component
5
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants YES