LOC_Os03g52630

Expression Profile

RGAP LOCUS ID LOC_Os03g52630
RAP-DB ID Os03g0736300
Function endoglucanase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 4

2) CELLO Prediction
localization Lysosomal
score 1.72

3) NUCPRED Prediction
localization Non Nuclear
score 0.28

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.64
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGH9A3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.111
NLS score 0.15
Protein Sequence >LOC_Os03g52630.1 protein
MFGRDPWGGPLEISNADSATDDDRSRDLDRGALMRQLDETQQSWLLAGPGDQAGKKKKKYVDLGCMVLDRKIFMWTVGTILGVGLFIGFVMMIVKLVPHK
RPPPPPPDQYTQALHKALMFFNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRKSLVGGFYDAGDAIKFNYPMAWSMTMLSWSVIEYKAKYEAIGELDHV
KELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVRGAKAL
YKFGRLQRGRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNTYLSVATAPGMAKHAGAYWLDSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYE
EILRTFHNQTDNVMCSYLPMYNSFNFTKGGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQLDYVLGKNPLKMSY
VVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNILIGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTNIHVKSGIDKNTI
FSAVPPMFPTPPPPPSAWKP

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term anatomical structure morphogenesis
4
GO Category Biological Process
GO Term cell growth
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Cellular comBiological Processonent
GO Term cytoplasm
7
GO Category Biological Process
GO Term response to stress
8
GO Category Biological Process
GO Term response to abiotic stimulus
9
GO Category Molecular Function
GO Term hydrolase activity
10
GO Category Cellular comBiological Processonent
GO Term Golgi apparatus
11
GO Category Biological Process
GO Term response to endogenous stimulus
12
GO Category Biological Process
GO Term biosynthetic process
13
GO Category Biological Process
GO Term carbohydrate metabolic process
14
GO Category Biological Process
GO Term multicellular organismal development
15
GO Category Cellular comBiological Processonent
GO Term endosome
16
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES