LOC_Os03g52460

Expression Profile

RGAP LOCUS ID LOC_Os03g52460
RAP-DB ID Os03g0735000
Function glucose-1-phosphate adenylyltransferase large subunit, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 11

2) CELLO Prediction
localization Chloroplast
score 3.869

3) NUCPRED Prediction
localization Non Nuclear
score 0.22

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.87
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAPL1|OsAGPL3|OsAGPL1
Function assigned as per literature OsAGPL3 encodes large subunit of the enzyme ADP-glucose pyrophosphorylase (AGP) and may play an essential for starch synthesis in the leaves of rice
Subcellular localization as per literature Plastid
Cells used for localization experiment Maize protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 17406793
Reference of localization https://link.springer.com/article/10.1007%2Fs11103-007-9153-z
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.117
NLS score -0.13
Protein Sequence >LOC_Os03g52460.1 protein
MAAMDLRVAAPASVAAAARCGTSLARPWPARAVGGGGGGGGRGRRLSVRTSVATTEAAAAAVGASEDAALEARDSKTVVAVILGGGAGTRLFPLTKRRAK
PAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLSRAYNFSNGVAFGDGFVEVLAATQTPGSEGKRWFQGTADAVRQFDWLFDDAKAKDIDD
VLILSGDHLYRMDYMDFVQSHRQRGADISICCLPIDDSRASDFGLMKIDDTGRVIAFSEKPKGDDLKAMQVDTTVLGLPQDEAKEKPYIASMGVYIFKKE
ILLNLLRWRFPTANDFGSEIIPASAKEINVKAYLFNDYWEDIGTIKSFFEANLSLAEQPPRFSFYDANKPMYTSRRNLPPSMINNSKITDSIISHGCFLD
SCRIEHSVVGIRSRIGSNVHLKDTVMLGADFYETDLERGELLAEGKVPIGIGENTKIQNCIIDKNARIGKNVTISNSEGVQEADRTSEGFYIRSGITIVL
KNSIIADGLVI

GO Analysis
1
GO Category Biological Process
GO Term generation of precursor metabolites and energy
2
GO Category Biological Process
GO Term biosynthetic process
3
GO Category Biological Process
GO Term carbohydrate metabolic process
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Molecular Function
GO Term transferase activity
6
GO Category Biological Process
GO Term cellular process
7
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No