LOC_Os03g52320

Expression Profile

RGAP LOCUS ID LOC_Os03g52320
RAP-DB ID Os03g0733600
Function GRF-interacting factor 1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 9

2) CELLO Prediction
localization Nuclear
score 3.31

3) NUCPRED Prediction
localization Non Nuclear
score 0.33

4) Y-Loc Prediction
localization Cytoplasm
score 39
confidence value 0.06
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) MKB3
Function assigned as per literature OsGIF1 is involved in the regulation of floral organ development
Subcellular localization as per literature OsGIF1 interact with GRF6 and GRF10 in the nucleus
Cells used for localization experiment Tobacco epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 24596329
Reference of localization http://www.plantphysiol.org/content/165/1/160
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.044
NLS score -0.47
Protein Sequence >LOC_Os03g52320.1 protein
MQQQHLMQMNQGMMGGYASPTTVTTDLIQQYLDENKQLILAILDNQNNGKVEECARNQAKLQHNLMYLAAIADSQPPQTAAMSQYPSNLMMQSGARYMPQ
QSAQMMAPQSLMAARSSMMYAQPALSPLQQQQQQQAAAAHGQLGMGSGGTTSGFSILHGEASMGGGGGGGGAGNSMMNAGVFSDFGRGGGGGGKEGSTSL
SVDVRGANSGAQSGDGEYLKGTEEEGS

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term biological_process
3
GO Category Molecular Function
GO Term molecular_function
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants YES