LOC_Os03g51510

Expression Profile

RGAP LOCUS ID LOC_Os03g51510
RAP-DB ID Os03g0725000
Function ribosomal protein L6, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization Cytoplasmic
score 2.211

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.8
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRpl6-1
Function assigned as per literature
Subcellular localization as per literature Mitochondria
Cells used for localization experiment Tobacco BY2 cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 19014580
Reference of localization https://bmcevolbiol.biomedcentral.com/articles/10.1186/1471-2148-8-314
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.214
NLS score 0.48
Protein Sequence >LOC_Os03g51510.2 protein
MEAKVFRFLKLVGVGFKARTEREGRELFLKLGYSHEVQFTAPPAVRVFCFKPNLICCTGIDKNRVHNFAGAVRNCKPPEVYKGKGILYIDEVIKLKPGKK
QKK

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term ribosome
2
GO Category Biological Process
GO Term translation
3
GO Category Cellular comBiological Processonent
GO Term intracellular
4
GO Category Molecular Function
GO Term structural molecule activity
5
GO Category Molecular Function
GO Term RNA binding
Presence of Splice variants YES