LOC_Os03g50810

Expression Profile

RGAP LOCUS ID LOC_Os03g50810
RAP-DB ID Os03g0717000
Function receptor protein kinase TMK1 precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 4

2) CELLO Prediction
localization Extracellular
score 1.011

3) NUCPRED Prediction
localization Non Nuclear
score 0.33

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.33
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsTMK
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.086
NLS score 0.1
Protein Sequence >LOC_Os03g50810.1 protein
MWRRRRGGGGGGGGGGVAVAVALAVMLVVGAAAGETAASDAAAMRAVARALGADKALGWSTGDPCSSPRAWAGVTCDSAGRVTAVQVGNRSLTGRLAPEV
RNLTALARLELFDNSISGELPSLAGLSSLQYLLVHNNGFTRIPPDFFKGLTALAAVSLDNNPFDPWPLPADLADCTSLTNFSANTANVTGALPDFFGTAL
PSLQRLSLAFNKMSGPVPASLATAPLQALWLNNQIGENQFNGSISFISNMTSLQELWLHSNDFTGPLPDFSGLASLSDLELRDNQLTGPVPDSLLKLGSL
TKVTLTNNLLQGPTPKFADKVKADVVPTTERFCLSTPGQPCDPRVNLLLEVAAEFQYPAKLADNWKGNDPCDGYIGVGCDAGNITVLNFARMGFSGSISP
AIGKITTLQKLILADNNITGTVPKEVAALPALTEVDLSNNNLYGKLPTFAAKNVLVKANGNPNIGKDAPAPSGSGGSGGSNAPDGGNGGDGSNGSPSSSS
AGIIAGSVVGAIAGVGLLAALGFYCYKRKQKPFGRVQSPHAMVVHPRHSGSDPDMVKITVAGGNVNGGAAASETYSQASSGPRDIHVVETGNMVISIQVL
RNVTNNFSDENVLGRGGFGTVYKGELHDGTKIAVKRMEAGVMGNKGLNEFKSEIAVLTKVRHRNLVSLLGYCLDGNERILVYEYMPQGTLSQHLFEWKEH
NLRPLEWKKRLSIALDVARGVEYLHSLAQQTFIHRDLKPSNILLGDDMKAKVADFGLVRLAPADGKCVSVETRLAGTFGYLAPEYAVTGRVTTKADVFSF
GVILMELITGRKALDETQPEDSMHLVTWFRRMQLSKDTFQKAIDPTIDLTEETLASVSTVAELAGHCCAREPHQRPDMGHAVNVLSTLSDVWKPSDPDSD
DSYGIDLDMTLPQALKKWQAFEDSSHFDGATSSFLASLDNTQTSIPTRPPGFAESFTSADGR

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Cellular comBiological Processonent
GO Term extracellular region
5
GO Category Molecular Function
GO Term kinase activity
6
GO Category Molecular Function
GO Term receptor activity
7
GO Category Molecular Function
GO Term signal transducer activity
8
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No