LOC_Os03g50290

Expression Profile

RGAP LOCUS ID LOC_Os03g50290
RAP-DB ID Os03g0710800
Function 14-3-3 protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Cytoplasmic
score 3.458

3) NUCPRED Prediction
localization Non Nuclear
score 0.17

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.97
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) GF14f
Function assigned as per literature GF14f is involved in responses to biotic and abiotic stresses
Subcellular localization as per literature Nucleus
Cells used for localization experiment rice callus and onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 16766513
Reference of localization https://academic.oup.com/dnaresearch/article/13/2/53/344906
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.123
NLS score -0.47
Protein Sequence >LOC_Os03g50290.2 protein
MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELS
KICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNL
AKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGDEIKEAAKPEGEGH

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Cellular comBiological Processonent
GO Term nuclear envelope
3
GO Category Cellular comBiological Processonent
GO Term cytoplasm
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
6
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES