LOC_Os03g49800

Expression Profile

RGAP LOCUS ID LOC_Os03g49800
RAP-DB ID Os03g0705300
Function phosphatidylinositol-4-phosphate 5-kinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Chloroplast
score 1.214

3) NUCPRED Prediction
localization Non Nuclear
score 0.37

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.93
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPIP5K1
Function assigned as per literature OsPIP5K1 acts with DWT1 and/or DWL2 to coordinate the uniform growth of rice shoots, likely through nuclear phosphoinositide signals
Subcellular localization as per literature Plasma membrane and nucleus
Cells used for localization experiment Tobacco (Nicotiana benthamiana) leaves
NUCLEAR or Not Nuclear NUCLEAR
PMID 31550392
Reference of localization https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.16216
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.13
NLS score -0.47
Protein Sequence >LOC_Os03g49800.1 protein
MRRVAPAMIAAAAGGGGGYDGEEADAGAAVVEKALPNGDVYRGGFAGGAPHGKGKYVWADGCMYEGEWRRGKASGKGRFSWPSGATFEGEFRGGRIEGQG
VFVGPDGATYRGAWAADRRHGVGAKSYANGDYYEGQWRRNLQDGHGRYVWANGNQYVGEWRAGVISGRGVLIWANGSRYDGVWENGVPRGTGVFTWPDGS
RYVGSWPRSCVDMPAISGTFFPPVGAGGGGAVRKRSSVEGVGDKASAVPRICIWESEGEAGDITCDIVDALEASMLYREATTVGGGVPYVRTQRSTRRVA
SGGTCWAPSAAATPEGKRPGQTISKGHKNYELMLQLQLGIRHSVGKSAAVPMRELSPADFDPKEKFWTRFPPEGSKVTPPHSSSDFRWKDYCPMVFRHLR
KLFSVDPADYMIAICGNDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKLLIRMLPSYYQHVSQYRDSLITRFYGVHCVKPLNGQKVRFIVMGNLFC
SEYRIHRRFDLKGSSYGRTADKFDDEIDETTTLKDLDLNFVFRLQRTWFRDLHEQLRRDCEFLESEGIMDYSFLVGVHFCDDLSASKTGLSTFTASPKFS
MKRESFQGGGGMPELCFSDSDFDRIPDCRKPLIRLGAHMPARAEQASRRSEFDPFLLNGGGFLAPNQTGEVYDVILYFGIIDILQDYDITKRLEHAYKSL
QTDPNSISAVDPKLYSKRFQDFIGRIFVEDG

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Molecular Function
GO Term kinase activity
3
GO Category Cellular comBiological Processonent
GO Term plasma membrane
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term lipid metabolic process
Presence of Splice variants No