LOC_Os03g49620

Expression Profile

RGAP LOCUS ID LOC_Os03g49620
RAP-DB ID Os03g0703200
Function BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 7

2) CELLO Prediction
localization Nuclear
score 1.517

3) NUCPRED Prediction
localization Non Nuclear
score 0.36

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.09
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) TMS10L
Function assigned as per literature TMS10L plays roles in postmeiotic tapetal development and pollen development by buffering environmental temperature changes
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Tobacco leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29087306
Reference of localization http://www.pnas.org/content/114/46/12327.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.098
NLS score -0.47
Protein Sequence >LOC_Os03g49620.3 protein
MDLLSVLLIIASLLPFSASDRQGDALYDMKLKLNATGNQLSDWNQNQVNPCTWNSVICDNNYNVVQVTLASMGFTGVLSPRIGELQFLNVLSLPGNKITG
GIPEQIGNLSSLTSLDLEDNLLVGPIPASLGQLSKLQILILSQNNLNGTIPDTVARISSLTDIRLAYNKLSGSIPGSLFQVARYNFSGNNLTCGANFLHP
CSSSISYQGSSHGSKVGIVLGTVVGAIGILIIGAVFIVCNGRRKSHLREVFVDVSGEDDRRIAFGQLKRFAWRELQLATDSFSEKNVLGQGGFGKVYKGA
LPDGTKIAVKRLTDYESPGGEAAFLREVELISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSVAYRLREFKPGEPILDWSARKRVAIGTARGLEYLHEH
CNPKIIHRDVKAANVLLDEDFEPVVGDFGLAKLVDVQKTSVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD
HVKKLQREGQLGAIVDRNLSSNYDGQEVEMMIQIALLCTQASPEDRPSMSEVVRMLEGEGLAERWEEWQQVEVTRRQDYERMQQRFDWGEDSIFNQEAIE
LSAGR

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term kinase activity
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES