LOC_Os03g49500

Expression Profile

RGAP LOCUS ID LOC_Os03g49500
RAP-DB ID Os03g0701700
Function ethylene receptor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 6

2) CELLO Prediction
localization PlasmaMembrane
score 3.2

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Cytoplasm
score 96
confidence value 0.47
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Os-ERS1
Function assigned as per literature OsERS1 maintains proper somatic cell organization and limits the overproliferation of male germ cells during early anther development
Subcellular localization as per literature Cytoplasm
Cells used for localization experiment onion (Allium cepa) cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29720556
Reference of localization http://www.plantphysiol.org/content/177/2/728.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.096
NLS score -0.47
Protein Sequence >LOC_Os03g49500.1 protein
MDGCDCIEPLWPTDELLIKYQYISDFFIALAYFSIPLELIYFVKKSSFFPYRWVLIQFGAFIVLCGATHLINLWTFTTHTKTVAMVMTVAKVSTAVVSCA
TALMLVHIIPDLLSVKTRELFLKNKAEQLDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGGTLGLEECALWMPSRSGSSLQLSHTLRHQ
ITVGSTVSINLPVVNQVFSSNRAIIIPHTSPLARIRPLAGRYVPPEVAAVRVPLLHLSNFQINDWPELSAKSYAIMVLMLPSDSARKWHVHELELVEVVA
DQVAVALSHAAILEESMRARDLLMEQNVALDLARREAEMAIRARNDFLAVMNHEMRTPMNAIIALSSLLLETELTPEQRLMVETVLKSSNLLATLINDVL
DLSKLEDGSLELEIKAFNLHAVFKEVMSFIKPIAAIKRLSVSVMLAPDLPLCAIGDEKRLMQTILNISGNAVKFTKEGHITLVASVVKADSLREFRTPDF
HPTASDDNFYLKVQIKDTGCGISPQDLPQVFTKFAQSQPGGNRGYSGSGLGLAICKRFVTLMGGHIWLDSEGTGRGCTVTFVIQLGICDNTNAYQQKLIP
LVWPSSGDADFVGPVPNAPNEEKGQASLKSRYQRSI

GO Analysis
1
GO Category Biological Process
GO Term response to endogenous stimulus
2
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
3
GO Category Biological Process
GO Term response to stress
4
GO Category Biological Process
GO Term response to biotic stimulus
5
GO Category Biological Process
GO Term signal transduction
6
GO Category Molecular Function
GO Term kinase activity
7
GO Category Molecular Function
GO Term protein binding
8
GO Category Biological Process
GO Term response to abiotic stimulus
9
GO Category Biological Process
GO Term cellular process
10
GO Category Molecular Function
GO Term signal transducer activity
11
GO Category Molecular Function
GO Term binding
12
GO Category Biological Process
GO Term metabolic process
13
GO Category Biological Process
GO Term protein modification process
14
GO Category Cellular comBiological Processonent
GO Term membrane
15
GO Category Biological Process
GO Term biosynthetic process
Presence of Splice variants YES