LOC_Os03g46470

Expression Profile

RGAP LOCUS ID LOC_Os03g46470
RAP-DB ID Os03g0667500
Function metal cation transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 5

2) CELLO Prediction
localization PlasmaMembrane
score 3.277

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.3
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsIRT1
Function assigned as per literature  OsIRT1 is a Fe2+ transporter expressed in roots and are induced by low-Fe conditions
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment onion epidermal cells 
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 16412081
Reference of localization https://onlinelibrary.wiley.com/doi/epdf/10.1111/j.1365-313X.2005.02624.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.07
NLS score -0.47
Protein Sequence >LOC_Os03g46470.1 protein
MATPRTLVPILPPVAALLLLLVAASSIPILAAAQPADACGGAPDQAAADGACHDVPRALRLKLIAIPTILVSSVVGVCLPLLSRSVPALRPDGGLFAVVK
AFASGVILATGYMHVLPDAFNNLTSPCLPRKPWSEFPFAAFVAMLAAVSTLMADSLMLTYYNRSKPRPSSGGDVAAVADHGESPDQGHRHGHGHGHGHGM
AVAKPDDVEATQVQLRRNRVVVQVLEIGIVVHSVVIGLGMGASQNVCTIRPLVAAMCFHQMFEGMGLGGCILQAEYGRRMRSVLVFFFSTTTPFGIALGL
ALTRVYRDNSPTALIVVGLLNAASAGLLHYMALVELLAADFMGPKLQGNVRLQLAAFLAVLLGAGGMSVMAKWA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Molecular Function
GO Term transporter activity
4
GO Category Biological Process
GO Term transport
5
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No