LOC_Os03g46330

Expression Profile

RGAP LOCUS ID LOC_Os03g46330
RAP-DB ID Os03g0666100
Function pattern formation protein EMB30, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Nuclear
score 1.17

3) NUCPRED Prediction
localization Non Nuclear
score 0.68

4) Y-Loc Prediction
localization Nuclear
score 75.88
confidence value 0.21
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) CRL4|OsGNOM1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.1
NLS score 0.02
Protein Sequence >LOC_Os03g46330.1 protein
MLLVQMGGMDKNHPFGIGQMENGNGSYASEAVTSDENSADGSGIVVEPYGIPCMVEIFHFLCSLLNVVEQIGVDEDLPLFALKLINSAIELGGSSIRKHP
KLLSLVQDELFRNLMQFGLSMSPLILSMVCSIVLNLYHHLRTELKLQLEAFFSCIILRLAQPRFGATYHQQEVAMEALVDFCRQKNFMVEMYANLDCDIT
CRNIFEELANLLSKSAFPINCPLSSMHILALEGLISVIQGMADRIGNATSRPELLPVELDEYTPFWTVKCENFSDPQHWVKFVRQRKYVKRRLMIGADHF
NRDPKKGLEFLQGTHLLPEKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAQTFDFQEMNLDTALRLFLETFRLPGESQKIQRVLEAFSDR
YYEQSPQAFANKDTALVLAYSIIMLNTDQHNMQVKKKMTEEDFIKNNRNINGGSDLPREMLSELYHSICRNEIKTTPEQGMGYFEMSPSRWIDLMRKSKS
TSLYIVGDSQPFLDHDMFAIMSGPTIAAIAVVFDHSEHEEVLLACVDGFLGVAKISAFHHLEDVLDDLVVSLCKFTTLLNTSLVEEPVTAFGDDLKARLA
TETLFTIANRYGDYIRTGWRNVLDCILRLHKLGLLPARVASDAADDSEVSAETVQGKPTHSSISTSHIPVMGTPRKSSGLMGRFSQLLSLDSEEPRSQPT
EQQLAAHQRTLQTIQKCRIDSIFTESKFLQPDSLLQLARALIWAAGRPQKVASSPDDEDTAVFCLELLIAITLNNRDRIVLLWQGVYEHIANIVQSTVMP
CALVEKAIFGLLRICQRLLPYKENLADELLRSLQLVLKLDARVADAYCENITQEVARLVKANAGHVKSQMGWRTVVLLLSITARHPDASEVGFEAIMYIM
SEGAHLSLSNYAFCIEASRQFAESRVGLIDRSIRALDLMADSANSLARWSQETKGTGEETDKVLEAIREMWLKLLQALKKLSLDQREEVRNHALTSLQRC
LTATEGVCLQSSTWSHAFDLVIFALLDDLLEISQNHSQKDYRNMEGSLVLAMKLVAKVYLQLLPDLFGLSSFCKLWLGVLSRMEKYIKIKVRGKRSDKLQ
ELIPELLKNILIAMKNRGILAKRSTIGGDSLWELTWLHANNISTSLQSDVFPSQEYEQHSSAGSPRGPNGVESRD

GO Analysis
1
GO Category Molecular Function
GO Term enzyme regulator activity
2
GO Category Cellular comBiological Processonent
GO Term cytoplasm
3
GO Category Biological Process
GO Term cell cycle
4
GO Category Molecular Function
GO Term transporter activity
5
GO Category Biological Process
GO Term transport
6
GO Category Biological Process
GO Term cellular process
7
GO Category Biological Process
GO Term embryo development
8
GO Category Biological Process
GO Term biological_process
9
GO Category Biological Process
GO Term cellular component organization
10
GO Category Biological Process
GO Term anatomical structure morphogenesis
11
GO Category Biological Process
GO Term cell growth
12
GO Category Biological Process
GO Term post-embryonic development
13
GO Category Molecular Function
GO Term protein binding
14
GO Category Biological Process
GO Term metabolic process
15
GO Category Biological Process
GO Term cell differentiation
16
GO Category Biological Process
GO Term multicellular organismal development
17
GO Category Biological Process
GO Term reproduction
Presence of Splice variants No