LOC_Os03g45370

Expression Profile

RGAP LOCUS ID LOC_Os03g45370
RAP-DB ID Os03g0656500
Function sodium/calcium exchanger protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 4.703

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.34
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCCX2
Function assigned as per literature OsCCX2 can be used as potential candidate for enhancing the abiotic stress tolerance in plants as well as for phytoremediation of heavy metal polluted soil.
Subcellular localization as per literature Tonoplast
Cells used for localization experiment N. benthamiana epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 26607171
Reference of localization https://www.nature.com/articles/srep17117.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.063
NLS score 0.22
Protein Sequence >LOC_Os03g45370.1 protein
MALLRRRGYSAAVPSACCFLLLLLVLSASHLLPTRRGHGGVLEGLALRGSASRSRSGSSSSSSAGEEQGSCQELQSIEGGEARCLYLRTHPPCAPAGYVD
YLRLFYCGFAHAPAAGYAAAVLWLAVLFYLLGDTASEYFCASLEGLSAELRLPPAIAGVTLLSLGNGAPDVFASVVSFAAGDGGGVGLNSALGGALFVST
VVAGVVALAAASRAGRGGVVVELRGFVRDICFLLLALCSLLAILVTGTVTVWVSASFVSLYVAYVLLVWTSHCCSEPGKPPQADLAAPLLLDDDGGVTPL
PSYSKNSAPSKKRAYLHCLLSAILIPLYLPRRLTIPDIAGHRWSRPCAVASLALAPVLLAATWASSCRHALAVLLGGALLGLLLAALAAATTEAASPPRG
RWRRVPWLAAGFLMSVLWAYTLARELVALLVAIGYMVGVRASVLGVTVLAWGDSLGDLVSNVAMALHGGAGGAQTAVSGCYAGPLFNTVVGLGLSLTLAA
GSQYPAPFAIPAGGAVYEAVGFLGAGLAWALLVVPARGMRLDRVYGMGLIAIYLAFVTIRVFDSLGLWTHSWWPA

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term transporter activity
4
GO Category Cellular comBiological Processonent
GO Term cell
5
GO Category Cellular comBiological Processonent
GO Term membrane
Presence of Splice variants No