LOC_Os03g45194

Expression Profile

RGAP LOCUS ID LOC_Os03g45194
RAP-DB ID Os03g0654600
Function oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Mitochondrial
score 2.501

3) NUCPRED Prediction
localization Non Nuclear
score 0.33

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.48
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category G2-like

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) NOL
Function assigned as per literature NOL and NYC1 are co-localized in the thylakoid membrane and act in the form of a complex as a chlorophyll breductase in rice.
Subcellular localization as per literature Plastids
Cells used for localization experiment onion epidermal cells 
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 18778405
Reference of localization https://onlinelibrary.wiley.com/doi/epdf/10.1111/j.1365-313X.2008.03670.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.11
NLS score -0.47
Protein Sequence >LOC_Os03g45194.1 protein
MAATAAYLPLRAQAQVGLAPLRPSGSAAAGARLPGRTARRRLAARGGPEAAGIRAEAVPGGGGVARRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNV
VICSRSAERVESAVTDLKKEFGEQHVWGIVCDVREGKDVKALVDFARDKMKYIDIWNHKKAGFSPYLCVPLAQINNAGSNAYSYKPLVETSDEALMEVIT
TNTLGLMICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMNEVNNVMVHNLSPGMVTTDLLMSGATTKQAKFFIN
ILAEPANVVADYLVPNIRAIPTNQSMKPTYIRFLTGLKAYSRIFSRIAFGARRNKIMSNSQPAQEDDCMSSILVSRLIRAMQPTRSYLRWSDDLHKMFVE
AVAYHGGPYEAKPTAVKETMQAMGVTSLTTHNIKSHLQKYRESFSSGVGSLHDHDLLRTTSPSKEALDLASEMVRDNDAAMAEIEMLNDLLLDHDIEMVE
TSFSVDDLQMMERELMSEIKLIEHNFEISESALDEYMDDLANYAFDLTGPANSSSP

GO Analysis
1
GO Category Biological Process
GO Term protein metabolic process
2
GO Category Biological Process
GO Term catabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No