LOC_Os03g44810
| RGAP LOCUS ID | LOC_Os03g44810 | ||||
| RAP-DB ID | Os03g0650900 | ||||
| Function | expressed protein | ||||
Sub-cellular Localization Predictions |
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1) WoLF-PSORT Prediction |
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| localization | Nuclear | ||||
| score | 8 | ||||
2) CELLO Prediction |
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| localization | Nuclear | ||||
| score | 2.752 | ||||
3) NUCPRED Prediction |
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| localization | Non Nuclear | ||||
| score | 0.42 | ||||
4) Y-Loc Prediction |
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| localization | Cytoplasm | ||||
| score | 78 | ||||
| confidence value | 0.55 | ||||
| Number Of Software Predicting Nucleus | 2 | ||||
| Seed Specific | No | ||||
| Transcription factor category | |||||
Experimental evidence for subcellular localization |
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| Published gene name (updated 1 January 2020) | OsNLA2 | ||||
| Function assigned as per literature | |||||
| Subcellular localization as per literature | Cytoplasm | ||||
| Cells used for localization experiment | Rice protoplasts and Tobacco leaves | ||||
| NUCLEAR or Not Nuclear | NOT NUCLEAR | ||||
| PMID | 28229491 | ||||
| Reference of localization | https://onlinelibrary.wiley.com/doi/epdf/10.1111/tpj.13516 | ||||
| Is Subcellular localization evidence by author available ? | No | ||||
Sequence Analysis |
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| Number of PAT4 | 0 | ||||
| Number of PAT7 | 0 | ||||
| Number of Bipartite | 0 | ||||
| Basic residues % | 0.133 | ||||
| NLS score | -0.47 | ||||
| Protein Sequence | >LOC_Os03g44810.1 protein MKFGAIYEEYLREQQDKYLTKCSHVEYKRLKKVLKKCRVGRSLQEDCPNGDQQEGNNESPDICKCNSCTLCDQMFFTELTKEASEIAGCFSSRVQRLLNL HVPSGFLRYIWRVRQCFIDDQQIMVQEGRMLLNYVTMNAIAIRKILKKYDKIHGSVSGRDFKSKMQTDHIELLQSPWLIELGAFHLNCNSSDIDETVGFL KNEFFKNFSCDLTEARPLMTMAISETMKYEYSLTCPICLDTLFNPYALSCGHLFCKGCACGAASVYIFQGVKSAPPEAKCPVCRSDGVFAHAVHMTELDL LIKTRSKDYWRQRLREERNEMVKQSKEYWDSQAMLSMGI |
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GO Analysis |
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| 1 |
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| Presence of Splice variants | YES | ||||