LOC_Os03g41390

Expression Profile

RGAP LOCUS ID LOC_Os03g41390
RAP-DB ID Os03g0610400
Function ZOS3-15 - C2H2 zinc finger protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 13

2) CELLO Prediction
localization Nuclear
score 3.655

3) NUCPRED Prediction
localization Non Nuclear
score 0.68

4) Y-Loc Prediction
localization Nuclear
score 99.61
confidence value 0.81
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMSR15
Function assigned as per literature OsMSR15 is an important regulator involved in plant response to drought stress
Subcellular localization as per literature Nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID not available
Reference of localization https://link.springer.com/article/10.1007/s12374-016-0539-9
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 4
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.118
NLS score 0.96
Protein Sequence >LOC_Os03g41390.1 protein
MAVEEVLDGAAPMLSSSPAASGEEVGARKPQQRCGGAEGWSKRKRSRRRHRDRAAAPPPHGSEEEHLALSLLMLARGHRDPSPAPQEQHGCSVCGRVFSS
YQALGGHKTSHRPRTPPTMAAVVVVDEPAATTASPAASSSNSGSGSGGGGGNKVHECSVCKKTFPTGQALGGHKRCHYEGPIGSGGGAAVAGRGFDLNLP
AVALPDIMTERCLPAAAEEEEVLSPLASFKKPRLMIPA

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Molecular Function
GO Term binding
4
GO Category Cellular comBiological Processonent
GO Term intracellular
5
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
6
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants No