LOC_Os03g40920

Expression Profile

RGAP LOCUS ID LOC_Os03g40920
RAP-DB ID Os03g0606200
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 9

2) CELLO Prediction
localization Nuclear
score 2.053

3) NUCPRED Prediction
localization Non Nuclear
score 0.7

4) Y-Loc Prediction
localization Chloroplast
score 4
confidence value 0.05
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) RMtATP6
Function assigned as per literature RMtATP6 protein acts as a subunit of ATP synthase, and is expressed in response to salt and osmotic stresses.
Subcellular localization as per literature Mitochondria
Cells used for localization experiment Tobacco protoplasts and yeast strain INVSc1
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 16317034
Reference of localization https://academic.oup.com/jxb/article/57/1/193/442103
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 6
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.228
NLS score 3.41
Protein Sequence >LOC_Os03g40920.1 protein
MAVELELFQKDSKGRFPWGPTKIWPTWRRGEAHLHAAAPLPNPKRDAITTTTIRFFPLRIEKKAKGPLDPPTTPRPPRRRRKRRRSRMFFSRFDPWPVFF
RREWKRCWPFLTGFAVTGAIITKMTAGFTEEDLKNSKFVQAHKKH

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Cellular comBiological Processonent
GO Term mitochondrion
4
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No